Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam20bQ8VCS3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam20bQ8VCS3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Fam20bQ8VCS3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Fam20bQ8VCS3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Fam20bQ8VCS3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam20bQ8VCS3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam20bQ8VCS3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam20bQ8VCS3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam20bQ8VCS3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms