Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Gm37179-201ENSMUST00000194862 823 ntBASIC20.28■□□□□ 0.84
Rpap2Q8VC34 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap2Q8VC34 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap2Q8VC34 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rpap2Q8VC34 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rpap2Q8VC34 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap2Q8VC34 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.25■□□□□ 0.83
Rpap2Q8VC34 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap2Q8VC34 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rpap2Q8VC34 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap2Q8VC34 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Gm6211-202ENSMUST00000167849 925 ntBASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap2Q8VC34 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Gm12933-201ENSMUST00000120203 872 ntBASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Gm22325-201ENSMUST00000158904 308 ntBASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpap2Q8VC34 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms