Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chrna3Q8R4G9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chrna3Q8R4G9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chrna3Q8R4G9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chrna3Q8R4G9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.08■□□□□ 0.49
Chrna3Q8R4G9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chrna3Q8R4G9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chrna3Q8R4G9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chrna3Q8R4G9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chrna3Q8R4G9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chrna3Q8R4G9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms