Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sf3a1Q8K4Z5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sf3a1Q8K4Z5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Gm10602-201ENSMUST00000098239 609 ntBASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sf3a1Q8K4Z5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sf3a1Q8K4Z5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sf3a1Q8K4Z5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Golph3-205ENSMUST00000228671 2842 ntBASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.54■■□□□ 1.2
Sf3a1Q8K4Z5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sf3a1Q8K4Z5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sf3a1Q8K4Z5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms