Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Gm7284-201ENSMUST00000131667 944 ntBASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx54Q8K4L0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ddx54Q8K4L0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.33■■□□□ 1.48
Ddx54Q8K4L0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Mir5130-201ENSMUST00000175160 84 ntBASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Ddx54Q8K4L0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 AC133598.3-202ENSMUST00000224219 531 ntBASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx54Q8K4L0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC24.3■■□□□ 1.48
Ddx54Q8K4L0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx54Q8K4L0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 AC154471.1-201ENSMUST00000224418 436 ntBASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Ddx54Q8K4L0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx54Q8K4L0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx54Q8K4L0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx54Q8K4L0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx54Q8K4L0 Gm22697-201ENSMUST00000175194 63 ntBASIC24.25■■□□□ 1.47
Ddx54Q8K4L0 Gm27463-201ENSMUST00000183569 57 ntBASIC24.25■■□□□ 1.47
Ddx54Q8K4L0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx54Q8K4L0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ddx54Q8K4L0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Gm12085-201ENSMUST00000119263 940 ntBASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Gm17661-201ENSMUST00000170317 270 ntBASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC24.24■■□□□ 1.47
Ddx54Q8K4L0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx54Q8K4L0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms