Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alms1Q8K4E0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Gm18666-201ENSMUST00000190039 958 ntBASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alms1Q8K4E0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.1■□□□□ 0.49
Alms1Q8K4E0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alms1Q8K4E0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.09■□□□□ 0.49
Alms1Q8K4E0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Alms1Q8K4E0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alms1Q8K4E0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.08■□□□□ 0.49
Alms1Q8K4E0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.08■□□□□ 0.49
Alms1Q8K4E0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alms1Q8K4E0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Gm6659-201ENSMUST00000174752 547 ntBASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Alms1Q8K4E0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alms1Q8K4E0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.06■□□□□ 0.48
Alms1Q8K4E0 Gm5417-201ENSMUST00000079706 384 ntBASIC18.06■□□□□ 0.48
Alms1Q8K4E0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.06■□□□□ 0.48
Alms1Q8K4E0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alms1Q8K4E0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alms1Q8K4E0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms