Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.57□□□□□ -0.56
Cystm1Q8K353 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cystm1Q8K353 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.56□□□□□ -0.56
Cystm1Q8K353 AC124603.1-201ENSMUST00000223843 308 ntBASIC11.56□□□□□ -0.56
Cystm1Q8K353 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cystm1Q8K353 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.55□□□□□ -0.56
Cystm1Q8K353 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.55□□□□□ -0.56
Cystm1Q8K353 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cystm1Q8K353 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.54□□□□□ -0.56
Cystm1Q8K353 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.54□□□□□ -0.56
Cystm1Q8K353 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Cystm1Q8K353 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cystm1Q8K353 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Gm20100-201ENSMUST00000209418 2272 ntBASIC11.53□□□□□ -0.56
Cystm1Q8K353 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC11.53□□□□□ -0.56
Cystm1Q8K353 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.53□□□□□ -0.56
Cystm1Q8K353 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms