Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Gm2559-201ENSMUST00000201323 363 ntBASIC19.96■□□□□ 0.79
Trim68Q8K243 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trim68Q8K243 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim68Q8K243 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Gm15565-201ENSMUST00000118890 427 ntBASIC19.95■□□□□ 0.78
Trim68Q8K243 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim68Q8K243 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Trim68Q8K243 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim68Q8K243 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Trim68Q8K243 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim68Q8K243 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim68Q8K243 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim68Q8K243 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim68Q8K243 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim68Q8K243 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim68Q8K243 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim68Q8K243 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim68Q8K243 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim68Q8K243 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
Trim68Q8K243 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim68Q8K243 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim68Q8K243 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim68Q8K243 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim68Q8K243 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim68Q8K243 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim68Q8K243 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim68Q8K243 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim68Q8K243 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim68Q8K243 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim68Q8K243 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim68Q8K243 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim68Q8K243 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Trim68Q8K243 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms