Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtn1Q8K0T0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Gm7290-201ENSMUST00000104990 617 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Gm12918-201ENSMUST00000120234 636 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Gm15710-201ENSMUST00000121821 636 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Gm5075-201ENSMUST00000196916 622 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.31■■□□□ 1
Rtn1Q8K0T0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtn1Q8K0T0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.3■■□□□ 1
Rtn1Q8K0T0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtn1Q8K0T0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Gm6211-202ENSMUST00000167849 925 ntBASIC21.29■■□□□ 1
Rtn1Q8K0T0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.29■■□□□ 1
Rtn1Q8K0T0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn1Q8K0T0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.28■■□□□ 1
Rtn1Q8K0T0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rtn1Q8K0T0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Gm13148-201ENSMUST00000118892 745 ntBASIC21.27■■□□□ 1
Rtn1Q8K0T0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Mir5133-201ENSMUST00000174955 77 ntBASIC21.27■■□□□ 1
Rtn1Q8K0T0 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.27■■□□□ 1
Rtn1Q8K0T0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn1Q8K0T0 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.27■□□□□ 0.99
Rtn1Q8K0T0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtn1Q8K0T0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Gm12933-201ENSMUST00000120203 872 ntBASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn1Q8K0T0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rtn1Q8K0T0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn1Q8K0T0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Rtn1Q8K0T0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn1Q8K0T0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms