Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CroccQ8CJ40 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CroccQ8CJ40 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CroccQ8CJ40 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CroccQ8CJ40 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Gm22325-201ENSMUST00000158904 308 ntBASIC17.67■□□□□ 0.42
CroccQ8CJ40 Gm27405-201ENSMUST00000184201 112 ntBASIC17.67■□□□□ 0.42
CroccQ8CJ40 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CroccQ8CJ40 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.66■□□□□ 0.42
CroccQ8CJ40 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CroccQ8CJ40 Gm26524-201ENSMUST00000192339 390 ntBASIC17.65■□□□□ 0.42
CroccQ8CJ40 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.65■□□□□ 0.42
CroccQ8CJ40 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.65■□□□□ 0.42
CroccQ8CJ40 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CroccQ8CJ40 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CroccQ8CJ40 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.64■□□□□ 0.42
CroccQ8CJ40 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Gm42569-201ENSMUST00000200539 472 ntBASIC17.64■□□□□ 0.41
CroccQ8CJ40 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.64■□□□□ 0.41
CroccQ8CJ40 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.64■□□□□ 0.41
CroccQ8CJ40 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CroccQ8CJ40 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.64■□□□□ 0.41
CroccQ8CJ40 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.63■□□□□ 0.41
CroccQ8CJ40 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.63■□□□□ 0.41
CroccQ8CJ40 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.63■□□□□ 0.41
CroccQ8CJ40 Gm37179-201ENSMUST00000194862 823 ntBASIC17.63■□□□□ 0.41
CroccQ8CJ40 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CroccQ8CJ40 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CroccQ8CJ40 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.62■□□□□ 0.41
CroccQ8CJ40 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CroccQ8CJ40 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms