Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.77■□□□□ 0.6
CopaQ8CIE6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Nespas-201ENSMUST00000143738 1083 ntBASIC18.77■□□□□ 0.6
CopaQ8CIE6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopaQ8CIE6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CopaQ8CIE6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CopaQ8CIE6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CopaQ8CIE6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Gm13148-201ENSMUST00000118892 745 ntBASIC18.76■□□□□ 0.59
CopaQ8CIE6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.76■□□□□ 0.59
CopaQ8CIE6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.76■□□□□ 0.59
CopaQ8CIE6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.76■□□□□ 0.59
CopaQ8CIE6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Grk6-206ENSMUST00000224995 2971 ntBASIC18.76■□□□□ 0.59
CopaQ8CIE6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CopaQ8CIE6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.75■□□□□ 0.59
CopaQ8CIE6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.75■□□□□ 0.59
CopaQ8CIE6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Gm6365-201ENSMUST00000054711 744 ntBASIC18.75■□□□□ 0.59
CopaQ8CIE6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.75■□□□□ 0.59
CopaQ8CIE6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopaQ8CIE6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Gm4968-201ENSMUST00000071458 858 ntBASIC18.74■□□□□ 0.59
CopaQ8CIE6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CopaQ8CIE6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.73■□□□□ 0.59
CopaQ8CIE6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.73■□□□□ 0.59
CopaQ8CIE6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.73■□□□□ 0.59
CopaQ8CIE6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.73■□□□□ 0.59
CopaQ8CIE6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.73■□□□□ 0.59
CopaQ8CIE6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.73■□□□□ 0.59
CopaQ8CIE6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CopaQ8CIE6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CopaQ8CIE6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopaQ8CIE6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms