Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Grk6-206ENSMUST00000224995 2971 ntBASIC18.09■□□□□ 0.49
Vps50Q8CI71 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Gm10849-201ENSMUST00000100397 618 ntBASIC18.09■□□□□ 0.49
Vps50Q8CI71 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps50Q8CI71 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps50Q8CI71 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps50Q8CI71 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.08■□□□□ 0.48
Vps50Q8CI71 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps50Q8CI71 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Gm10033-202ENSMUST00000211874 928 ntBASIC18.07■□□□□ 0.48
Vps50Q8CI71 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Vps50Q8CI71 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Vps50Q8CI71 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps50Q8CI71 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 AA386476-201ENSMUST00000098781 1665 ntBASIC18.06■□□□□ 0.48
Vps50Q8CI71 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps50Q8CI71 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.05■□□□□ 0.48
Vps50Q8CI71 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Gm26571-201ENSMUST00000181399 666 ntBASIC18.05■□□□□ 0.48
Vps50Q8CI71 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.05■□□□□ 0.48
Vps50Q8CI71 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps50Q8CI71 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Gm13234-201ENSMUST00000120010 747 ntBASIC18.04■□□□□ 0.48
Vps50Q8CI71 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vps50Q8CI71 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps50Q8CI71 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Vps50Q8CI71 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps50Q8CI71 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.03■□□□□ 0.48
Vps50Q8CI71 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.03■□□□□ 0.48
Vps50Q8CI71 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms