Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rftn2Q8CHX7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rftn2Q8CHX7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rftn2Q8CHX7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.66■□□□□ 0.74
Rftn2Q8CHX7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rftn2Q8CHX7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rftn2Q8CHX7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Rftn2Q8CHX7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rftn2Q8CHX7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rftn2Q8CHX7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rftn2Q8CHX7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rftn2Q8CHX7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Gm10812-201ENSMUST00000099864 546 ntBASIC19.63■□□□□ 0.73
Rftn2Q8CHX7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Gm13158-201ENSMUST00000122007 736 ntBASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.62■□□□□ 0.73
Rftn2Q8CHX7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rftn2Q8CHX7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rftn2Q8CHX7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Zfp783-201ENSMUST00000095946 670 ntBASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rftn2Q8CHX7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rftn2Q8CHX7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rftn2Q8CHX7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rftn2Q8CHX7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rftn2Q8CHX7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rftn2Q8CHX7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.58■□□□□ 0.72
Rftn2Q8CHX7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rftn2Q8CHX7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rftn2Q8CHX7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rftn2Q8CHX7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms