Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Gm6139-201ENSMUST00000079261 882 ntBASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Gm13146-201ENSMUST00000118508 780 ntBASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox30Q8CGW4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox30Q8CGW4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Gm26833-201ENSMUST00000180899 440 ntBASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox30Q8CGW4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox30Q8CGW4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox30Q8CGW4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Gm40848-201ENSMUST00000221998 324 ntBASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox30Q8CGW4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox30Q8CGW4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms