Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.79■□□□□ 0.44
SynpoQ8CC35 BC021767-201ENSMUST00000126387 1716 ntBASIC17.79■□□□□ 0.44
SynpoQ8CC35 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SynpoQ8CC35 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynpoQ8CC35 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.78■□□□□ 0.44
SynpoQ8CC35 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.77■□□□□ 0.44
SynpoQ8CC35 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynpoQ8CC35 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SynpoQ8CC35 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
SynpoQ8CC35 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SynpoQ8CC35 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SynpoQ8CC35 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SynpoQ8CC35 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.77■□□□□ 0.43
SynpoQ8CC35 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.76■□□□□ 0.43
SynpoQ8CC35 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynpoQ8CC35 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.75■□□□□ 0.43
SynpoQ8CC35 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynpoQ8CC35 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms