Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc46a2Q8CA03 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Fst-202ENSMUST00000223640 2612 ntBASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a2Q8CA03 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a2Q8CA03 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a2Q8CA03 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc46a2Q8CA03 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a2Q8CA03 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.66■□□□□ 0.42
Slc46a2Q8CA03 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms