Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp1Q8C8C1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp1Q8C8C1 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.18■□□□□ 0.98
Rtp1Q8C8C1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Mtag2-201ENSMUST00000058665 714 ntBASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp1Q8C8C1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Gm23634-201ENSMUST00000175071 91 ntBASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp1Q8C8C1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp1Q8C8C1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtp1Q8C8C1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.14■□□□□ 0.98
Rtp1Q8C8C1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Odf3b-204ENSMUST00000227834 930 ntBASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp1Q8C8C1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp1Q8C8C1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.12■□□□□ 0.97
Rtp1Q8C8C1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Gm3375-201ENSMUST00000203929 796 ntBASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp1Q8C8C1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp1Q8C8C1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtp1Q8C8C1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rtp1Q8C8C1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.09■□□□□ 0.97
Rtp1Q8C8C1 Gm6345-202ENSMUST00000180900 204 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms