Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.32■□□□□ 0.52
Aph1bQ8C7N7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aph1bQ8C7N7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aph1bQ8C7N7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Aph1bQ8C7N7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Gm13534-201ENSMUST00000121169 513 ntBASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Aph1bQ8C7N7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aph1bQ8C7N7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Aph1bQ8C7N7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aph1bQ8C7N7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Aph1bQ8C7N7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.27■□□□□ 0.52
Aph1bQ8C7N7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.27■□□□□ 0.52
Aph1bQ8C7N7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aph1bQ8C7N7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aph1bQ8C7N7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aph1bQ8C7N7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aph1bQ8C7N7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aph1bQ8C7N7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aph1bQ8C7N7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aph1bQ8C7N7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms