Protein–RNA interactions for Protein: Q8C3L1

Ssuh2, Protein SSUH2 homolog, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssuh2Q8C3L1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssuh2Q8C3L1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssuh2Q8C3L1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Ssuh2Q8C3L1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssuh2Q8C3L1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssuh2Q8C3L1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssuh2Q8C3L1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Ssuh2Q8C3L1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ssuh2Q8C3L1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 BC021767-201ENSMUST00000126387 1716 ntBASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ssuh2Q8C3L1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssuh2Q8C3L1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssuh2Q8C3L1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Ssuh2Q8C3L1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ssuh2Q8C3L1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssuh2Q8C3L1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ssuh2Q8C3L1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssuh2Q8C3L1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssuh2Q8C3L1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssuh2Q8C3L1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ssuh2Q8C3L1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms