Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Gm22325-201ENSMUST00000158904 308 ntBASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp44Q8C2S0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.69■■□□□ 1.06
Usp44Q8C2S0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Mir5133-201ENSMUST00000174955 77 ntBASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp44Q8C2S0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp44Q8C2S0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.66■■□□□ 1.06
Usp44Q8C2S0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp44Q8C2S0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp44Q8C2S0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp44Q8C2S0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Usp44Q8C2S0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Usp44Q8C2S0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Usp44Q8C2S0 Gm26524-201ENSMUST00000192339 390 ntBASIC21.64■■□□□ 1.05
Usp44Q8C2S0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Usp44Q8C2S0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp44Q8C2S0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp44Q8C2S0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp44Q8C2S0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms