Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.25■□□□□ 0.35
Cpne1Q8C166 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.25■□□□□ 0.35
Cpne1Q8C166 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne1Q8C166 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne1Q8C166 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Gm37179-201ENSMUST00000194862 823 ntBASIC17.23■□□□□ 0.35
Cpne1Q8C166 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne1Q8C166 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne1Q8C166 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne1Q8C166 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Cpne1Q8C166 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne1Q8C166 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms