Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam43aQ8BUP8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam43aQ8BUP8 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.45■□□□□ 0.87
Fam43aQ8BUP8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Fam43aQ8BUP8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Fam43aQ8BUP8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam43aQ8BUP8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam43aQ8BUP8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam43aQ8BUP8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Fam43aQ8BUP8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam43aQ8BUP8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam43aQ8BUP8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms