Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp43Q8BUM9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp43Q8BUM9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp43Q8BUM9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp43Q8BUM9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp43Q8BUM9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp43Q8BUM9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp43Q8BUM9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp43Q8BUM9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Usp43Q8BUM9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Gm27405-201ENSMUST00000184201 112 ntBASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp43Q8BUM9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp43Q8BUM9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp43Q8BUM9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.64■□□□□ 0.58
Usp43Q8BUM9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
Usp43Q8BUM9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Usp43Q8BUM9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp43Q8BUM9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms