Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf18Q8BM39 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf18Q8BM39 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf18Q8BM39 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf18Q8BM39 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Prpf18Q8BM39 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf18Q8BM39 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf18Q8BM39 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms