Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 Gm42545-201ENSMUST00000202755 922 ntBASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col16a1Q8BLX7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col16a1Q8BLX7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col16a1Q8BLX7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC24.51■■□□□ 1.51
Col16a1Q8BLX7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC24.51■■□□□ 1.51
Col16a1Q8BLX7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Col16a1Q8BLX7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col16a1Q8BLX7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Gm38285-201ENSMUST00000192928 922 ntBASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Col16a1Q8BLX7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Timm23-208ENSMUST00000226683 750 ntBASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC24.49■■□□□ 1.51
Col16a1Q8BLX7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col16a1Q8BLX7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col16a1Q8BLX7 Gm7712-202ENSMUST00000222331 1510 ntBASIC24.48■■□□□ 1.51
Col16a1Q8BLX7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC24.48■■□□□ 1.51
Col16a1Q8BLX7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col16a1Q8BLX7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Col16a1Q8BLX7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col16a1Q8BLX7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col16a1Q8BLX7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col16a1Q8BLX7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col16a1Q8BLX7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col16a1Q8BLX7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Gm7367-201ENSMUST00000057611 492 ntBASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col16a1Q8BLX7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC24.45■■□□□ 1.51
Col16a1Q8BLX7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC24.45■■□□□ 1.5
Col16a1Q8BLX7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col16a1Q8BLX7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col16a1Q8BLX7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms