Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne4Q8BLR2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne4Q8BLR2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne4Q8BLR2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne4Q8BLR2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne4Q8BLR2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Gm29257-201ENSMUST00000186115 639 ntBASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne4Q8BLR2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Gm13148-201ENSMUST00000118892 745 ntBASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne4Q8BLR2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne4Q8BLR2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpne4Q8BLR2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Gm5408-201ENSMUST00000197998 747 ntBASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne4Q8BLR2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cpne4Q8BLR2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Cpne4Q8BLR2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms