Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm4Q8BKA3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16■□□□□ 0.15
Srrm4Q8BKA3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm4Q8BKA3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Gm6365-201ENSMUST00000054711 744 ntBASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm4Q8BKA3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm4Q8BKA3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Gm29257-201ENSMUST00000186115 639 ntBASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Srrm4Q8BKA3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Srrm4Q8BKA3 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.95■□□□□ 0.14
Srrm4Q8BKA3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms