Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Smarcal1Q8BJL0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcal1Q8BJL0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcal1Q8BJL0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Gm15565-201ENSMUST00000118890 427 ntBASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smarcal1Q8BJL0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Gm10138-203ENSMUST00000206952 366 ntBASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcal1Q8BJL0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Mir5122-201ENSMUST00000175004 89 ntBASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcal1Q8BJL0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcal1Q8BJL0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcal1Q8BJL0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcal1Q8BJL0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcal1Q8BJL0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcal1Q8BJL0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcal1Q8BJL0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcal1Q8BJL0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smarcal1Q8BJL0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms