Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Chmp2bQ8BJF9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2bQ8BJF9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2bQ8BJF9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2bQ8BJF9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2bQ8BJF9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.83■□□□□ 0.6
Chmp2bQ8BJF9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms