Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Mir5122-201ENSMUST00000175004 89 ntBASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp1Q8BJ37 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp1Q8BJ37 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp1Q8BJ37 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tdp1Q8BJ37 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Gm43183-201ENSMUST00000200632 547 ntBASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Tdp1Q8BJ37 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tdp1Q8BJ37 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tdp1Q8BJ37 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
Tdp1Q8BJ37 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tdp1Q8BJ37 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Gm10138-203ENSMUST00000206952 366 ntBASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Gm9987-201ENSMUST00000069768 567 ntBASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Gm5417-201ENSMUST00000079706 384 ntBASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tdp1Q8BJ37 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms