Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf38Q8BI21 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf38Q8BI21 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.77■□□□□ 0.43
Rnf38Q8BI21 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf38Q8BI21 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf38Q8BI21 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Gm26833-201ENSMUST00000180899 440 ntBASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.76■□□□□ 0.43
Rnf38Q8BI21 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf38Q8BI21 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf38Q8BI21 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf38Q8BI21 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.73■□□□□ 0.43
Rnf38Q8BI21 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf38Q8BI21 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms