Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atg4bQ8BGE6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atg4bQ8BGE6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atg4bQ8BGE6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atg4bQ8BGE6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atg4bQ8BGE6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atg4bQ8BGE6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Atg4bQ8BGE6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
Atg4bQ8BGE6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atg4bQ8BGE6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.39■□□□□ 0.37
Atg4bQ8BGE6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atg4bQ8BGE6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Gm6365-201ENSMUST00000054711 744 ntBASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atg4bQ8BGE6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atg4bQ8BGE6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atg4bQ8BGE6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Gm37179-201ENSMUST00000194862 823 ntBASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atg4bQ8BGE6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Atg4bQ8BGE6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms