Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Gm6420-201ENSMUST00000193885 723 ntBASIC18.02■□□□□ 0.48
Trim50Q810I2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.02■□□□□ 0.48
Trim50Q810I2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim50Q810I2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trim50Q810I2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim50Q810I2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Nespas-201ENSMUST00000143738 1083 ntBASIC18.01■□□□□ 0.47
Trim50Q810I2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim50Q810I2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim50Q810I2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18■□□□□ 0.47
Trim50Q810I2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trim50Q810I2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18■□□□□ 0.47
Trim50Q810I2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim50Q810I2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Trim50Q810I2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim50Q810I2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim50Q810I2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim50Q810I2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim50Q810I2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim50Q810I2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim50Q810I2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.98■□□□□ 0.47
Trim50Q810I2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim50Q810I2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim50Q810I2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim50Q810I2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim50Q810I2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim50Q810I2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim50Q810I2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Trim50Q810I2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim50Q810I2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim50Q810I2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim50Q810I2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim50Q810I2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim50Q810I2 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.96■□□□□ 0.47
Trim50Q810I2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms