Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn34b3Q80ZS5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.19■□□□□ 0.34
Cldn34b3Q80ZS5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn34b3Q80ZS5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Cldn34b3Q80ZS5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cldn34b3Q80ZS5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn34b3Q80ZS5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Gm27405-201ENSMUST00000184201 112 ntBASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn34b3Q80ZS5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cldn34b3Q80ZS5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn34b3Q80ZS5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn34b3Q80ZS5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.14■□□□□ 0.34
Cldn34b3Q80ZS5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn34b3Q80ZS5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Gm7291-201ENSMUST00000199147 382 ntBASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn34b3Q80ZS5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Gm6365-201ENSMUST00000054711 744 ntBASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn34b3Q80ZS5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn34b3Q80ZS5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn34b3Q80ZS5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms