Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf40bQ80W14 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf40bQ80W14 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Golph3-205ENSMUST00000228671 2842 ntBASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf40bQ80W14 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf40bQ80W14 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Gm18666-201ENSMUST00000190039 958 ntBASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf40bQ80W14 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.21■□□□□ 0.99
Prpf40bQ80W14 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf40bQ80W14 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf40bQ80W14 Gm11249-201ENSMUST00000117071 859 ntBASIC21.19■□□□□ 0.98
Prpf40bQ80W14 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf40bQ80W14 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf40bQ80W14 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf40bQ80W14 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf40bQ80W14 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.18■□□□□ 0.98
Prpf40bQ80W14 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Mir1199-201ENSMUST00000117015 119 ntBASIC21.18■□□□□ 0.98
Prpf40bQ80W14 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms