Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Grk6-206ENSMUST00000224995 2971 ntBASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.23■□□□□ 0.67
Prpf38bQ80SY5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf38bQ80SY5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf38bQ80SY5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf38bQ80SY5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Gm18666-201ENSMUST00000190039 958 ntBASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 AA386476-201ENSMUST00000098781 1665 ntBASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf38bQ80SY5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Mir1199-201ENSMUST00000117015 119 ntBASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Gm10819-201ENSMUST00000099988 561 ntBASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf38bQ80SY5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Gm10231-201ENSMUST00000181584 441 ntBASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Gm10175-202ENSMUST00000208752 441 ntBASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf38bQ80SY5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms