Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Lca5Q80ST9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lca5Q80ST9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lca5Q80ST9 Gm2399-201ENSMUST00000104944 225 ntBASIC21.11■□□□□ 0.97
Lca5Q80ST9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lca5Q80ST9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Lca5Q80ST9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lca5Q80ST9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lca5Q80ST9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Lca5Q80ST9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.11■□□□□ 0.97
Lca5Q80ST9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.1■□□□□ 0.97
Lca5Q80ST9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lca5Q80ST9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.1■□□□□ 0.97
Lca5Q80ST9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.09■□□□□ 0.97
Lca5Q80ST9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lca5Q80ST9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.09■□□□□ 0.97
Lca5Q80ST9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lca5Q80ST9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lca5Q80ST9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.08■□□□□ 0.97
Lca5Q80ST9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.08■□□□□ 0.97
Lca5Q80ST9 Trmt13-210ENSMUST00000198454 880 ntBASIC21.08■□□□□ 0.97
Lca5Q80ST9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.08■□□□□ 0.97
Lca5Q80ST9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lca5Q80ST9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lca5Q80ST9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lca5Q80ST9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lca5Q80ST9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lca5Q80ST9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lca5Q80ST9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.06■□□□□ 0.96
Lca5Q80ST9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.06■□□□□ 0.96
Lca5Q80ST9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Gm27275-201ENSMUST00000184318 272 ntBASIC21.06■□□□□ 0.96
Lca5Q80ST9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Lca5Q80ST9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lca5Q80ST9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lca5Q80ST9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lca5Q80ST9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lca5Q80ST9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lca5Q80ST9 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.05■□□□□ 0.96
Lca5Q80ST9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.05■□□□□ 0.96
Lca5Q80ST9 Flg-201ENSMUST00000050758 1488 ntBASIC21.05■□□□□ 0.96
Lca5Q80ST9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lca5Q80ST9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lca5Q80ST9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lca5Q80ST9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.04■□□□□ 0.96
Lca5Q80ST9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lca5Q80ST9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.04■□□□□ 0.96
Lca5Q80ST9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms