Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssx9Q6XAS3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ssx9Q6XAS3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssx9Q6XAS3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Ssx9Q6XAS3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ssx9Q6XAS3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ssx9Q6XAS3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ssx9Q6XAS3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ssx9Q6XAS3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssx9Q6XAS3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssx9Q6XAS3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssx9Q6XAS3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssx9Q6XAS3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssx9Q6XAS3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssx9Q6XAS3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssx9Q6XAS3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ssx9Q6XAS3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssx9Q6XAS3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssx9Q6XAS3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms