Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Timd4Q6U7R4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Timd4Q6U7R4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Timd4Q6U7R4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Timd4Q6U7R4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Mir5133-201ENSMUST00000174955 77 ntBASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Timd4Q6U7R4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.14■□□□□ 0.34
Timd4Q6U7R4 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Gm7290-201ENSMUST00000104990 617 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Gm12918-201ENSMUST00000120234 636 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Gm15710-201ENSMUST00000121821 636 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Gm5075-201ENSMUST00000196916 622 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Timd4Q6U7R4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Gm6211-202ENSMUST00000167849 925 ntBASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Gm10602-201ENSMUST00000098239 609 ntBASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Timd4Q6U7R4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.12■□□□□ 0.33
Timd4Q6U7R4 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Timd4Q6U7R4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Timd4Q6U7R4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Timd4Q6U7R4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Timd4Q6U7R4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Timd4Q6U7R4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Timd4Q6U7R4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Timd4Q6U7R4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Timd4Q6U7R4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms