Protein–RNA interactions for Protein: Q6QR59

Tcaf3, TRPM8 channel-associated factor 3, mousemouse

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf3Q6QR59 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcaf3Q6QR59 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tcaf3Q6QR59 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Flg-201ENSMUST00000050758 1488 ntBASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Gm5417-201ENSMUST00000079706 384 ntBASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcaf3Q6QR59 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Mir5122-201ENSMUST00000175004 89 ntBASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcaf3Q6QR59 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcaf3Q6QR59 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcaf3Q6QR59 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Gm11643-201ENSMUST00000119578 864 ntBASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcaf3Q6QR59 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcaf3Q6QR59 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tcaf3Q6QR59 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms