Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn10aQ6QIY3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn10aQ6QIY3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Gm10013-201ENSMUST00000106074 672 ntBASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Scn10aQ6QIY3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn10aQ6QIY3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn10aQ6QIY3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn10aQ6QIY3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn10aQ6QIY3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn10aQ6QIY3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn10aQ6QIY3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn10aQ6QIY3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn10aQ6QIY3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 Gm33142-201ENSMUST00000193913 867 ntBASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.12■□□□□ 0.97
Scn10aQ6QIY3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn10aQ6QIY3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Gm45058-201ENSMUST00000205810 766 ntBASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn10aQ6QIY3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms