Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.56■□□□□ 0.08
Rif1Q6PR54 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rif1Q6PR54 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Gm7860-201ENSMUST00000121190 879 ntBASIC15.55■□□□□ 0.08
Rif1Q6PR54 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rif1Q6PR54 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rif1Q6PR54 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.54■□□□□ 0.08
Rif1Q6PR54 Gm7370-201ENSMUST00000219471 767 ntBASIC15.54■□□□□ 0.08
Rif1Q6PR54 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rif1Q6PR54 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.54■□□□□ 0.08
Rif1Q6PR54 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Gm28659-201ENSMUST00000188013 759 ntBASIC15.53■□□□□ 0.08
Rif1Q6PR54 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Gm21559-201ENSMUST00000220638 855 ntBASIC15.53■□□□□ 0.08
Rif1Q6PR54 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rif1Q6PR54 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rif1Q6PR54 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rif1Q6PR54 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rif1Q6PR54 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.52■□□□□ 0.08
Rif1Q6PR54 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rif1Q6PR54 Gm27463-201ENSMUST00000183569 57 ntBASIC15.52■□□□□ 0.08
Rif1Q6PR54 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Gm11594-201ENSMUST00000122313 162 ntBASIC15.52■□□□□ 0.07
Rif1Q6PR54 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.52■□□□□ 0.07
Rif1Q6PR54 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Rif1Q6PR54 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.51■□□□□ 0.07
Rif1Q6PR54 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms