Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Gm12821-201ENSMUST00000120022 600 ntBASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd3Q6P9Z1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd3Q6P9Z1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd3Q6P9Z1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.89■□□□□ 0.3
Smarcd3Q6P9Z1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.89■□□□□ 0.29
Smarcd3Q6P9Z1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms