Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Krt39Q6IFX4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Krt39Q6IFX4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Krt39Q6IFX4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Krt39Q6IFX4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt39Q6IFX4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.36■□□□□ 0.85
Krt39Q6IFX4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Gm26833-201ENSMUST00000180899 440 ntBASIC20.35■□□□□ 0.85
Krt39Q6IFX4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.35■□□□□ 0.85
Krt39Q6IFX4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt39Q6IFX4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.33■□□□□ 0.85
Krt39Q6IFX4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Krt39Q6IFX4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt39Q6IFX4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt39Q6IFX4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Krt39Q6IFX4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms