Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhga7Q6DD96 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhga7Q6DD96 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhga7Q6DD96 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhga7Q6DD96 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Fst-202ENSMUST00000223640 2612 ntBASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhga7Q6DD96 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhga7Q6DD96 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhga7Q6DD96 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhga7Q6DD96 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhga7Q6DD96 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga7Q6DD96 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcdhga7Q6DD96 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhga7Q6DD96 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms