Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr1Q64729 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr1Q64729 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr1Q64729 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr1Q64729 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.08■□□□□ 0.01
Tgfbr1Q64729 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr1Q64729 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr1Q64729 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tgfbr1Q64729 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.08■□□□□ 0
Tgfbr1Q64729 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr1Q64729 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tgfbr1Q64729 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tgfbr1Q64729 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.07■□□□□ 0
Tgfbr1Q64729 Gm12251-201ENSMUST00000117893 792 ntBASIC15.07■□□□□ 0
Tgfbr1Q64729 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tgfbr1Q64729 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.07■□□□□ 0
Tgfbr1Q64729 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr1Q64729 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tgfbr1Q64729 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tgfbr1Q64729 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Gm9847-201ENSMUST00000052528 599 ntBASIC15.06■□□□□ 0
Tgfbr1Q64729 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
Tgfbr1Q64729 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.06■□□□□ 0
Tgfbr1Q64729 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr1Q64729 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr1Q64729 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr1Q64729 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr1Q64729 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr1Q64729 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Tgfbr1Q64729 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.05■□□□□ -0
Tgfbr1Q64729 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.05■□□□□ -0
Tgfbr1Q64729 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.05■□□□□ -0
Tgfbr1Q64729 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.05■□□□□ -0
Tgfbr1Q64729 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.05■□□□□ -0
Tgfbr1Q64729 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr1Q64729 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tgfbr1Q64729 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tgfbr1Q64729 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.04■□□□□ -0
Tgfbr1Q64729 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.04■□□□□ -0
Tgfbr1Q64729 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.04■□□□□ -0
Tgfbr1Q64729 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tgfbr1Q64729 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Tgfbr1Q64729 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr1Q64729 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.03■□□□□ -0
Tgfbr1Q64729 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.03■□□□□ -0
Tgfbr1Q64729 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.03■□□□□ -0
Tgfbr1Q64729 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.03■□□□□ -0
Tgfbr1Q64729 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.03■□□□□ -0
Tgfbr1Q64729 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.03■□□□□ -0
Tgfbr1Q64729 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.03■□□□□ -0
Tgfbr1Q64729 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tgfbr1Q64729 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.03■□□□□ -0
Tgfbr1Q64729 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr1Q64729 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms