Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sox16Q62247 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox16Q62247 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Sox16Q62247 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sox16Q62247 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox16Q62247 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox16Q62247 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.52□□□□□ -0.72
Sox16Q62247 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox16Q62247 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Sox16Q62247 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox16Q62247 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Gm5987-201ENSMUST00000196433 1151 ntBASIC10.52□□□□□ -0.73
Sox16Q62247 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox16Q62247 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox16Q62247 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Sox16Q62247 Gm7292-201ENSMUST00000194706 2527 ntBASIC10.52□□□□□ -0.73
Sox16Q62247 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox16Q62247 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox16Q62247 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sox16Q62247 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sox16Q62247 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sox16Q62247 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sox16Q62247 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sox16Q62247 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sox16Q62247 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Sox16Q62247 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox16Q62247 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sox16Q62247 Gm4419-202ENSMUST00000226239 1431 ntBASIC10.5□□□□□ -0.73
Sox16Q62247 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sox16Q62247 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 Gm45605-201ENSMUST00000210265 4269 ntBASIC10.5□□□□□ -0.73
Sox16Q62247 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox16Q62247 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox16Q62247 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox16Q62247 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox16Q62247 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox16Q62247 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox16Q62247 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox16Q62247 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sox16Q62247 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms