Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm7514-201ENSMUST00000209475 934 ntBASIC19.74■□□□□ 0.75
Six2Q62232 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Six2Q62232 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.74■□□□□ 0.75
Six2Q62232 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.74■□□□□ 0.75
Six2Q62232 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.73■□□□□ 0.75
Six2Q62232 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.73■□□□□ 0.75
Six2Q62232 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Six2Q62232 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Six2Q62232 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Six2Q62232 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Six2Q62232 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.73■□□□□ 0.75
Six2Q62232 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.73■□□□□ 0.75
Six2Q62232 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six2Q62232 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Gm18671-201ENSMUST00000214826 683 ntBASIC19.72■□□□□ 0.75
Six2Q62232 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.72■□□□□ 0.75
Six2Q62232 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.72■□□□□ 0.75
Six2Q62232 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six2Q62232 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Six2Q62232 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Six2Q62232 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
Six2Q62232 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Six2Q62232 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Six2Q62232 Gm10849-201ENSMUST00000100397 618 ntBASIC19.71■□□□□ 0.75
Six2Q62232 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
Six2Q62232 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Six2Q62232 Gm18284-201ENSMUST00000172604 624 ntBASIC19.71■□□□□ 0.75
Six2Q62232 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.71■□□□□ 0.75
Six2Q62232 AV356131-201ENSMUST00000206201 750 ntBASIC19.71■□□□□ 0.75
Six2Q62232 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Six2Q62232 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.71■□□□□ 0.75
Six2Q62232 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six2Q62232 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six2Q62232 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Six2Q62232 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six2Q62232 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Six2Q62232 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Six2Q62232 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Six2Q62232 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six2Q62232 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six2Q62232 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.7■□□□□ 0.74
Six2Q62232 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Six2Q62232 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six2Q62232 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six2Q62232 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.69■□□□□ 0.74
Six2Q62232 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six2Q62232 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six2Q62232 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six2Q62232 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six2Q62232 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.69■□□□□ 0.74
Six2Q62232 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six2Q62232 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Six2Q62232 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Six2Q62232 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.68■□□□□ 0.74
Six2Q62232 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six2Q62232 Rarb-207ENSMUST00000225921 2756 ntBASIC19.67■□□□□ 0.74
Six2Q62232 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.67■□□□□ 0.74
Six2Q62232 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Six2Q62232 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six2Q62232 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Six2Q62232 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Fst-202ENSMUST00000223640 2612 ntBASIC19.66■□□□□ 0.74
Six2Q62232 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms