Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.18■□□□□ 0.98
Foxn1Q61575 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.18■□□□□ 0.98
Foxn1Q61575 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Foxn1Q61575 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Foxn1Q61575 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Foxn1Q61575 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Foxn1Q61575 Gm15375-201ENSMUST00000119510 849 ntBASIC21.17■□□□□ 0.98
Foxn1Q61575 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Foxn1Q61575 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxn1Q61575 Gm44771-201ENSMUST00000206975 626 ntBASIC21.17■□□□□ 0.98
Foxn1Q61575 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxn1Q61575 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxn1Q61575 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxn1Q61575 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Foxn1Q61575 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Foxn1Q61575 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.17■□□□□ 0.98
Foxn1Q61575 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxn1Q61575 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Foxn1Q61575 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Foxn1Q61575 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Foxn1Q61575 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Foxn1Q61575 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.16■□□□□ 0.98
Foxn1Q61575 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Foxn1Q61575 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Foxn1Q61575 Gm7284-201ENSMUST00000131667 944 ntBASIC21.16■□□□□ 0.98
Foxn1Q61575 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.16■□□□□ 0.98
Foxn1Q61575 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxn1Q61575 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Foxn1Q61575 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.15■□□□□ 0.98
Foxn1Q61575 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.15■□□□□ 0.98
Foxn1Q61575 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Foxn1Q61575 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Foxn1Q61575 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxn1Q61575 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Foxn1Q61575 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.14■□□□□ 0.98
Foxn1Q61575 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Foxn1Q61575 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Foxn1Q61575 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Foxn1Q61575 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Foxn1Q61575 Zfp783-201ENSMUST00000095946 670 ntBASIC21.14■□□□□ 0.97
Foxn1Q61575 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Foxn1Q61575 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.13■□□□□ 0.97
Foxn1Q61575 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Foxn1Q61575 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.13■□□□□ 0.97
Foxn1Q61575 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxn1Q61575 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Foxn1Q61575 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Foxn1Q61575 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.12■□□□□ 0.97
Foxn1Q61575 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.12■□□□□ 0.97
Foxn1Q61575 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxn1Q61575 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.11■□□□□ 0.97
Foxn1Q61575 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxn1Q61575 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxn1Q61575 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxn1Q61575 Gm17661-201ENSMUST00000170317 270 ntBASIC21.11■□□□□ 0.97
Foxn1Q61575 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxn1Q61575 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxn1Q61575 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Foxn1Q61575 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.1■□□□□ 0.97
Foxn1Q61575 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Foxn1Q61575 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxn1Q61575 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxn1Q61575 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.1■□□□□ 0.97
Foxn1Q61575 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.1■□□□□ 0.97
Foxn1Q61575 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Foxn1Q61575 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxn1Q61575 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxn1Q61575 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Foxn1Q61575 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.1■□□□□ 0.97
Foxn1Q61575 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxn1Q61575 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxn1Q61575 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms