Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Sox17Q61473 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.31■□□□□ 0.36
Sox17Q61473 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox17Q61473 Gm5812-201ENSMUST00000061073 957 ntBASIC17.31■□□□□ 0.36
Sox17Q61473 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox17Q61473 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sox17Q61473 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Gm15546-201ENSMUST00000122095 826 ntBASIC17.3■□□□□ 0.36
Sox17Q61473 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.3■□□□□ 0.36
Sox17Q61473 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Sox17Q61473 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox17Q61473 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Sox17Q61473 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox17Q61473 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox17Q61473 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.3■□□□□ 0.36
Sox17Q61473 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sox17Q61473 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.29■□□□□ 0.36
Sox17Q61473 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox17Q61473 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Sox17Q61473 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox17Q61473 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Sox17Q61473 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sox17Q61473 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox17Q61473 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.28■□□□□ 0.36
Sox17Q61473 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox17Q61473 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox17Q61473 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.27■□□□□ 0.36
Sox17Q61473 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox17Q61473 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox17Q61473 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox17Q61473 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox17Q61473 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.27■□□□□ 0.36
Sox17Q61473 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sox17Q61473 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox17Q61473 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox17Q61473 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Sox17Q61473 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox17Q61473 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox17Q61473 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sox17Q61473 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sox17Q61473 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.26■□□□□ 0.35
Sox17Q61473 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.26■□□□□ 0.35
Sox17Q61473 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.26■□□□□ 0.35
Sox17Q61473 Golgb1-201ENSMUST00000023534 498 ntBASIC17.26■□□□□ 0.35
Sox17Q61473 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.26■□□□□ 0.35
Sox17Q61473 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.26■□□□□ 0.35
Sox17Q61473 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox17Q61473 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox17Q61473 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox17Q61473 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox17Q61473 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.25■□□□□ 0.35
Sox17Q61473 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms